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出境医 / 临床实验 / Transcriptome and Metabolic Analyses of CHAPLE Disease (CHAPLEOMIC)

Transcriptome and Metabolic Analyses of CHAPLE Disease (CHAPLEOMIC)

Study Description
Brief Summary:
CHAPLE syndrome (complement hyperactivation, angiopathic thrombosis, protein losing enteropathy) is a newly discovered genetic disorder, which is caused by deleterious mutations in the CD55 gene. Patients often suffer from chronic manifestations that may lead to life-threatening complications despite conventional treatment options.The cause of gastrointestinal protein loss is distorted lacteals in the gut, referred to as primary intestinal lymphangiectasia (PIL). There is a second group of patients with PIL with intact CD55, referred to here as "non-CHAPLE PIL". The current study aims to explore the signatures of CHAPLE and non-CHAPLE PILs, discover druggable molecular targets and identify biomarkers that can direct therapy. A subgroup of patients with CHAPLE syndrome receive treatment with a complement C5 blocker, eculizumab, on an off-label basis. This study involves serial transcriptome and metabolic profiling of biological samples under eculizumab therapy and correlates them with the clinical response. Overall, the aim of this research is to integrate clinical data and high-throughput metabolic profiling approaches to better characterize the etiology of PILs and develop novel therapeutic approaches.

Condition or disease Intervention/treatment
CD55 - Cluster of Differentiation Antigen 55 Deficiency Primary Intestinal Lymphangiectasis Protein-Losing Enteropathies Complement Regulatory Factor Defect Drug: Eculizumab Injection

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Study Design
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Study Type : Observational [Patient Registry]
Estimated Enrollment : 60 participants
Observational Model: Cohort
Time Perspective: Prospective
Target Follow-Up Duration: 24 Months
Official Title: Transcriptome and Metabolic Analyses of CHAPLE Disease Patients With or Without Eculizumab Treatment
Actual Study Start Date : June 15, 2018
Estimated Primary Completion Date : September 15, 2019
Estimated Study Completion Date : June 15, 2020
Arms and Interventions
Group/Cohort Intervention/treatment
CHAPLE patients, without eculizumab treatment
Patients with suspected CHAPLE syndrome undergo flow-cytometry based CD55 surface staining of peripheral blood samples. Those patients with loss of CD55 protein expression are diagnosed with CHAPLE syndrome. A subgroup of the CHAPLE patients describe only mild symptoms and are not treated with eculizumab, but monitored closely for any disease progression.
Control subjects- no intervention
Healthy subjects with no history of any chronic disease. All investigational analyses are performed on both the case and the control subjects. Therefore, the same type of biological specimens collected from the case group are collected from the control group simultaneously.
Non-CHAPLE PILs
PIL patients with intact CD55 on flow-cytometry assesment undergo genetic testing to exclude a potential missense mutation in the CD55 gene that impairs its function while retaining protein expression. Overall, patients and their parents undergo exome sequencing as trios, and examined for potential gene mutations underlying their disease. Non-CHAPLE PILs are also examined by high-throughput investigation similarly to CHAPLE patients.
CHAPLE patients on eculizumab
Among CHAPLE patients, there is a subgroup who receive eculizumab treatment. These patients are prospectively followed and biological samples collected at baseline as well as periodically under therapy. Eculizumab (Soliris) is being provided for CHAPLE patients on an off-label basis upon approval of the physician's request of the drug by Turkish Medicines and Medical Devices Agency (TMMDA) of Turkish Ministry of Health. The dosage and interval of the drug is determined according to manufacturer's recommendations based on the weight of the patients.
Drug: Eculizumab Injection
Patients receive eculizumab as deemed necessary by the primary physician
Other Name: Soliris

Outcome Measures
Primary Outcome Measures :
  1. Reversal of protein-losing enteropathy [ Time Frame: 3-6 months ]
    Serum levels of blood proteins should be normalized. At least 2 out of 3 parameters including albumin, total protein and immunoglobulin G should reach age-specific normal range.

  2. Reversal of patient-specific major symptoms [ Time Frame: 12-18 months ]
    The major symptoms are variable in CHAPLE patients. The symptoms present in a particular patient should be corrected under therapy.


Secondary Outcome Measures :
  1. Reversal of other systemic components of the disease. [ Time Frame: 12-18 months ]
    E.g., thrombosis, enterocolitis, micronutrient deficiency, etc.

  2. Correction of previous biochemical and radiological abnormalities [ Time Frame: 6-18 months ]
    E.g., micronutrient deficiency, thrombocytosis; bowell wall thickening, contrast enhancement, recanalization of a thrombotic vessel segment, etc.

  3. Cessation of previous medications [ Time Frame: 3-18 months ]
    Continueed need for previous medications to treat various manifestations of CHAPLE syndrome will be monitored


Biospecimen Retention:   Samples With DNA
Peripheral blood mononuclear cells (PBMC) Serum Plasma Stool

Eligibility Criteria
Layout table for eligibility information
Ages Eligible for Study:   up to 60 Years   (Child, Adult)
Sexes Eligible for Study:   All
Accepts Healthy Volunteers:   Yes
Sampling Method:   Non-Probability Sample
Study Population
All PIL patients, including CHAPLE and non-CHAPLE PILs are to be included in the study.Among the CHAPLE patients who receive eculizumab therapy a prospective follow-up is made. Age matched healthy subjects form the control group.
Criteria

Inclusion Criteria:

  1. Patients diagnosed with PIL form the study groups and deem eligible for the study unless there is a risk associated with blood draw.
  2. The patients with CHAPLE syndrome who receive eculizumab therapy and consent to participate in this study are followed prospectively and clinical data collected. Biological sample collection and molecular investigations are to be made only if the patient is willing to provide biological samples, including peripheral blood and stool.

Exclusion Criteria:

  1. Presence of a concomitant disease that leads to hypoproteinemia at the time of starting eculizumab such as a urinary protein loss or a hepatic disease that affects production of proteins by liver.
  2. A concomitant disease that leads to secondary intestinal lymphangiectasia such as a fontan procedure for congenital heart disease.
  3. Unstable clinical condition not allowing blood draw, such as severe anemia.
Contacts and Locations

Contacts
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Contact: Ahmet O Özen, M.D. 905357400857 ahmet.ozen@marmara.edu.tr
Contact: Nurhan Kasap, M.D. 905357400857 n_aruci@hotmail.com

Locations
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Turkey
Marmara University Recruiting
Istanbul, Turkey
Contact: Ahmet O Özen, M.D.    905357400857    ahmet.ozen@marmara.edu.tr   
Contact: Nurhan Kasap, M.D.    905357400857    mailto:n_aruci@hotmail.com   
Sponsors and Collaborators
Marmara University
National Institute of Allergy and Infectious Diseases (NIAID)
Investigators
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Study Director: Michael J Lenardo, M.D. National Institute of Allergy and Infectious Diseases (NIAID)
Tracking Information
First Submitted Date May 12, 2019
First Posted Date May 15, 2019
Last Update Posted Date August 14, 2019
Actual Study Start Date June 15, 2018
Estimated Primary Completion Date September 15, 2019   (Final data collection date for primary outcome measure)
Current Primary Outcome Measures
 (submitted: May 12, 2019)
  • Reversal of protein-losing enteropathy [ Time Frame: 3-6 months ]
    Serum levels of blood proteins should be normalized. At least 2 out of 3 parameters including albumin, total protein and immunoglobulin G should reach age-specific normal range.
  • Reversal of patient-specific major symptoms [ Time Frame: 12-18 months ]
    The major symptoms are variable in CHAPLE patients. The symptoms present in a particular patient should be corrected under therapy.
Original Primary Outcome Measures Same as current
Change History
Current Secondary Outcome Measures
 (submitted: May 12, 2019)
  • Reversal of other systemic components of the disease. [ Time Frame: 12-18 months ]
    E.g., thrombosis, enterocolitis, micronutrient deficiency, etc.
  • Correction of previous biochemical and radiological abnormalities [ Time Frame: 6-18 months ]
    E.g., micronutrient deficiency, thrombocytosis; bowell wall thickening, contrast enhancement, recanalization of a thrombotic vessel segment, etc.
  • Cessation of previous medications [ Time Frame: 3-18 months ]
    Continueed need for previous medications to treat various manifestations of CHAPLE syndrome will be monitored
Original Secondary Outcome Measures Same as current
Current Other Pre-specified Outcome Measures Not Provided
Original Other Pre-specified Outcome Measures Not Provided
 
Descriptive Information
Brief Title Transcriptome and Metabolic Analyses of CHAPLE Disease
Official Title Transcriptome and Metabolic Analyses of CHAPLE Disease Patients With or Without Eculizumab Treatment
Brief Summary CHAPLE syndrome (complement hyperactivation, angiopathic thrombosis, protein losing enteropathy) is a newly discovered genetic disorder, which is caused by deleterious mutations in the CD55 gene. Patients often suffer from chronic manifestations that may lead to life-threatening complications despite conventional treatment options.The cause of gastrointestinal protein loss is distorted lacteals in the gut, referred to as primary intestinal lymphangiectasia (PIL). There is a second group of patients with PIL with intact CD55, referred to here as "non-CHAPLE PIL". The current study aims to explore the signatures of CHAPLE and non-CHAPLE PILs, discover druggable molecular targets and identify biomarkers that can direct therapy. A subgroup of patients with CHAPLE syndrome receive treatment with a complement C5 blocker, eculizumab, on an off-label basis. This study involves serial transcriptome and metabolic profiling of biological samples under eculizumab therapy and correlates them with the clinical response. Overall, the aim of this research is to integrate clinical data and high-throughput metabolic profiling approaches to better characterize the etiology of PILs and develop novel therapeutic approaches.
Detailed Description

CHAPLE syndrome is a newly discovered genetic disorder characterized by excessive loss of proteins in the gastrointestinal tract, referred to as protein-losing enteropathy. The disease typically presents in early childhood with facial and extremity edema in relation to hypoalbuminemia, chronic diarrhea, failure to thrive and, in extreme cases, severe thromboembolic disease that can lead to premature death. Patients afflicted with this newly discovered disease have been treated with conventional medications, including inflammatory bowel disease drugs to reduce gastrointestinal inflammation, albumin and immunoglobulin replacement therapy, dietary modification, supportive measures to supplement micronutrients and vitamins, surgery to remove affected intestinal segments, among others. These interventions have often provided only partial relief, with no capacity to alter the natural course of the disease.

CHAPLE syndrome is caused by loss of a complement regulatory protein due to deleterious mutations in the CD55 gene, which results in excessive activation of the complement system. Based on the scientific observations that complement hyperactivation is the primary event that underlies disease manifestations, it was hypothesized that complement inhibition therapy can potentially reverse the pathological processes. Through a compessionate program 3 CHAPLE patients from a single family have been treated with a complement C5 blocker antibody called eculizumab, with favorable response (Kurolap et al. PMID: 28657861). While these observations confirm the primary role of complement hyper activation in PIL associated with CHAPLE syndrome, the pathogenesis of PILs not related to CD55 deficiency (non-CHAPLE PIL) remains unknown. It is hypothesized that that there may be pathogenetic intersections between CHAPLE and non-CHAPLE PILs.

Following a clinical observation that eculizumab provides a rapid clinical relief in unrelated CHAPLE patients based in Turkey similar to Kurolap et al.'s report, researchers of this study decided to evaluate the clinical outcome of eculizumab among subsequent CHAPLE patients who are placed on this therapy. In parallel, molecular investigations on biological samples under eculizumab therapy are being carried to dissect the key alterations under complement C5 blockade.

The current study is based on use of high-throughput methods to investigate PILs, including exome sequencing (for the non-CHAPLE PILs), transcriptomics, proteome and microbiome investigations. The aims of the study include; 1. Discovery of signatures and biomarkers in CHAPLE, 2. Identification of the molecular etiology of non-CHAPLE PILs and potentially discover novel gene defects. The integrated application of genomics, transcriptome, proteomics and microbiome aims to identify key mediators and pathways operative in the pathogenesis of intestinal lymphangiectasias. Serial evaluation and longitudinal follow up of patient samples under eculizumab (anti-complement C5 antibody) therapy investigates dynamic alterations in the pathological profiles in CHAPLE syndrome. It is anticipiated that these studies will improve the diagnosis and treatment of CHAPLE and related conditions.

Goals of the current study include:

  1. To discover novel gene defects underlying PILs not related to CD55 deficiency.
  2. To identify signatures of CHAPLE disease and non-CHAPLE PILs that may reveal key mediators of disease and additional novel therapeutic targets.
  3. To explore the efficacy of eculizumab in a larger group of CHAPLE patients from unrelated families, with variable degree of disease severity.
  4. To analyze patient samples collected before and during eculizumab therapy with the following objectives:

    1. To understand relations between eculizumab concentration, complement function (CH50, AH50) and complement protein levels (C3, C5, CFB, C3a, C5a, sC5b-9, Bb, Ba)
    2. To explore biomarkers of inflammation and thrombosis, complications of the disease that can occur in certain affected individuals.
Study Type Observational [Patient Registry]
Study Design Observational Model: Cohort
Time Perspective: Prospective
Target Follow-Up Duration 24 Months
Biospecimen Retention:   Samples With DNA
Description:
Peripheral blood mononuclear cells (PBMC) Serum Plasma Stool
Sampling Method Non-Probability Sample
Study Population All PIL patients, including CHAPLE and non-CHAPLE PILs are to be included in the study.Among the CHAPLE patients who receive eculizumab therapy a prospective follow-up is made. Age matched healthy subjects form the control group.
Condition
  • CD55 - Cluster of Differentiation Antigen 55 Deficiency
  • Primary Intestinal Lymphangiectasis
  • Protein-Losing Enteropathies
  • Complement Regulatory Factor Defect
Intervention Drug: Eculizumab Injection
Patients receive eculizumab as deemed necessary by the primary physician
Other Name: Soliris
Study Groups/Cohorts
  • CHAPLE patients, without eculizumab treatment
    Patients with suspected CHAPLE syndrome undergo flow-cytometry based CD55 surface staining of peripheral blood samples. Those patients with loss of CD55 protein expression are diagnosed with CHAPLE syndrome. A subgroup of the CHAPLE patients describe only mild symptoms and are not treated with eculizumab, but monitored closely for any disease progression.
  • Control subjects- no intervention
    Healthy subjects with no history of any chronic disease. All investigational analyses are performed on both the case and the control subjects. Therefore, the same type of biological specimens collected from the case group are collected from the control group simultaneously.
  • Non-CHAPLE PILs
    PIL patients with intact CD55 on flow-cytometry assesment undergo genetic testing to exclude a potential missense mutation in the CD55 gene that impairs its function while retaining protein expression. Overall, patients and their parents undergo exome sequencing as trios, and examined for potential gene mutations underlying their disease. Non-CHAPLE PILs are also examined by high-throughput investigation similarly to CHAPLE patients.
  • CHAPLE patients on eculizumab
    Among CHAPLE patients, there is a subgroup who receive eculizumab treatment. These patients are prospectively followed and biological samples collected at baseline as well as periodically under therapy. Eculizumab (Soliris) is being provided for CHAPLE patients on an off-label basis upon approval of the physician's request of the drug by Turkish Medicines and Medical Devices Agency (TMMDA) of Turkish Ministry of Health. The dosage and interval of the drug is determined according to manufacturer's recommendations based on the weight of the patients.
    Intervention: Drug: Eculizumab Injection
Publications *
  • Ozen A. CHAPLE syndrome uncovers the primary role of complement in a familial form of Waldmann's disease. Immunol Rev. 2019 Jan;287(1):20-32. doi: 10.1111/imr.12715. Review.
  • Ozen A, Comrie WA, Lenardo MJ. CD55 Deficiency and Protein-Losing Enteropathy. N Engl J Med. 2017 Oct 12;377(15):1499-1500. doi: 10.1056/NEJMc1710011.
  • Ozen A, Comrie WA, Ardy RC, Domínguez Conde C, Dalgic B, Beser ÖF, Morawski AR, Karakoc-Aydiner E, Tutar E, Baris S, Ozcay F, Serwas NK, Zhang Y, Matthews HF, Pittaluga S, Folio LR, Unlusoy Aksu A, McElwee JJ, Krolo A, Kiykim A, Baris Z, Gulsan M, Ogulur I, Snapper SB, Houwen RHJ, Leavis HL, Ertem D, Kain R, Sari S, Erkan T, Su HC, Boztug K, Lenardo MJ. CD55 Deficiency, Early-Onset Protein-Losing Enteropathy, and Thrombosis. N Engl J Med. 2017 Jul 6;377(1):52-61. doi: 10.1056/NEJMoa1615887. Epub 2017 Jun 28.
  • Kurolap A, Eshach Adiv O, Hershkovitz T, Tabib A, Karbian N, Paperna T, Mory A, Vachyan A, Slijper N, Steinberg R, Zohar Y, Mevorach D, Baris Feldman H. Eculizumab Is Safe and Effective as a Long-term Treatment for Protein-losing Enteropathy Due to CD55 Deficiency. J Pediatr Gastroenterol Nutr. 2019 Mar;68(3):325-333. doi: 10.1097/MPG.0000000000002198.
  • Kurolap A, Eshach-Adiv O, Hershkovitz T, Paperna T, Mory A, Oz-Levi D, Zohar Y, Mandel H, Chezar J, Azoulay D, Peleg S, Half EE, Yahalom V, Finkel L, Weissbrod O, Geiger D, Tabib A, Shaoul R, Magen D, Bonstein L, Mevorach D, Baris HN. Loss of CD55 in Eculizumab-Responsive Protein-Losing Enteropathy. N Engl J Med. 2017 Jul 6;377(1):87-89. doi: 10.1056/NEJMc1707173. Epub 2017 Jun 28.

*   Includes publications given by the data provider as well as publications identified by ClinicalTrials.gov Identifier (NCT Number) in Medline.
 
Recruitment Information
Recruitment Status Recruiting
Estimated Enrollment
 (submitted: May 12, 2019)
60
Original Estimated Enrollment Same as current
Estimated Study Completion Date June 15, 2020
Estimated Primary Completion Date September 15, 2019   (Final data collection date for primary outcome measure)
Eligibility Criteria

Inclusion Criteria:

  1. Patients diagnosed with PIL form the study groups and deem eligible for the study unless there is a risk associated with blood draw.
  2. The patients with CHAPLE syndrome who receive eculizumab therapy and consent to participate in this study are followed prospectively and clinical data collected. Biological sample collection and molecular investigations are to be made only if the patient is willing to provide biological samples, including peripheral blood and stool.

Exclusion Criteria:

  1. Presence of a concomitant disease that leads to hypoproteinemia at the time of starting eculizumab such as a urinary protein loss or a hepatic disease that affects production of proteins by liver.
  2. A concomitant disease that leads to secondary intestinal lymphangiectasia such as a fontan procedure for congenital heart disease.
  3. Unstable clinical condition not allowing blood draw, such as severe anemia.
Sex/Gender
Sexes Eligible for Study: All
Ages up to 60 Years   (Child, Adult)
Accepts Healthy Volunteers Yes
Contacts
Contact: Ahmet O Özen, M.D. 905357400857 ahmet.ozen@marmara.edu.tr
Contact: Nurhan Kasap, M.D. 905357400857 n_aruci@hotmail.com
Listed Location Countries Turkey
Removed Location Countries  
 
Administrative Information
NCT Number NCT03950804
Other Study ID Numbers 09.2018.242
ZIAAI000717-22 ( U.S. NIH Grant/Contract )
Has Data Monitoring Committee No
U.S. FDA-regulated Product
Studies a U.S. FDA-regulated Drug Product: No
Studies a U.S. FDA-regulated Device Product: No
IPD Sharing Statement
Plan to Share IPD: No
Responsible Party Ahmet Ozen, Marmara University
Study Sponsor Marmara University
Collaborators National Institute of Allergy and Infectious Diseases (NIAID)
Investigators
Study Director: Michael J Lenardo, M.D. National Institute of Allergy and Infectious Diseases (NIAID)
PRS Account Marmara University
Verification Date August 2019